Extensive changes stemming from a rethinking of the Pandoc data

structure. Key and Note blocks have been removed. Link and image URLs
are now stored directly in Link and Image inlines, and note blocks
are stored in Note inlines. This requires changes in both parsers
and writers. Markdown and RST parsers need to extract data from key
and note blocks and insert them into the relevant inline elements.
Other parsers can be simplified, since there is no longer any need to
construct separate key and note blocks. Markdown, RST, and HTML writers
need to construct lists of notes; Markdown and RST writers need to
construct lists of link references (when the --reference-links option
is specified); and the RST writer needs to construct a list of image
substitution references. All writers have been rewritten to use the
State monad when state is required.  This rewrite yields a small speed
boost and considerably cleaner code. 

* Text/Pandoc/Definition.hs:
  + blocks:  removed Key and Note
  + inlines:  removed NoteRef, added Note
  + modified Target:  there is no longer a 'Ref' target; all targets
    are explicit URL, title pairs

* Text/Pandoc/Shared.hs:

  + Added 'Reference', 'isNoteBlock', 'isKeyBlock', 'isLineClump',
    used in some of the readers.
  + Removed 'generateReference', 'keyTable', 'replaceReferenceLinks',
    'replaceRefLinksBlockList', along with some auxiliary functions
    used only by them.  These are no longer needed, since
    reference links are resolved in the Markdown and RST readers.
  + Moved 'inTags', 'selfClosingTag', 'inTagsSimple', and 'inTagsIndented'
    to the Docbook writer, since that is now the only module that uses
    them.
  + Changed name of 'escapeSGMLString' to 'escapeStringForXML'
  + Added KeyTable and NoteTable types
  + Removed fields from ParserState;  'stateKeyBlocks', 'stateKeysUsed',
    'stateNoteBlocks', 'stateNoteIdentifiers', 'stateInlineLinks'. 
    Added 'stateKeys' and 'stateNotes'.
  + Added clause for Note to 'prettyBlock'.
  + Added 'writerNotes', 'writerReferenceLinks' fields to WriterOptions.

* Text/Pandoc/Entities.hs: Renamed 'escapeSGMLChar' and
  'escapeSGMLString' to 'escapeCharForXML' and 'escapeStringForXML'

* Text/ParserCombinators/Pandoc.hs: Added lineClump parser: parses a raw
  line block up to and including following blank lines.

* Main.hs:  Replaced --inline-links with --reference-links.

* README: 
  + Documented --reference-links and removed description of --inline-links.
  + Added note that footnotes may occur anywhere in the document, but must
    be at the outer level, not embedded in block elements.
  
* man/man1/pandoc.1, man/man1/html2markdown.1: Removed --inline-links
  option, added --reference-links option

* Markdown and RST readers:
  + Rewrote to fit new Pandoc definition.  Since there are no longer
    Note or Key blocks, all note and key blocks are parsed on a first pass
    through the document.  Once tables of notes and keys have been constructed,
    the remaining parts of the document are reassembled and parsed.
  + Refactored link parsers.

* LaTeX and HTML readers: Rewrote to fit new Pandoc definition. Since
  there are no longer Note or Key blocks, notes and references can be
  parsed in a single pass through the document.

* RST, Markdown, and HTML writers: Rewrote using state monad new Pandoc
  and definition. State is used to hold lists of references footnotes to
  and be printed at the end of the document.

* RTF and LaTeX writers: Rewrote using new Pandoc definition. (Because
  of the different treatment of footnotes, the "notes" parameter is no
  longer needed in the block and inline conversion functions.)

* Docbook writer:
  + Moved the functions 'attributeList', 'inTags', 'selfClosingTag',
    'inTagsSimple', 'inTagsIndented' from Text/Pandoc/Shared, since
    they are now used only by the Docbook writer.
  + Rewrote using new Pandoc definition.  (Because of the different
    treatment of footnotes, the "notes" parameter is no longer needed
    in the block and inline conversion functions.)

* Updated test suite

* Throughout:  old haskell98 module names replaced by hierarchical module
  names, e.g. List by Data.List.

* debian/control: Include libghc6-xhtml-dev instead of libghc6-html-dev
  in "Build-Depends."

* cabalize: 
  + Remove haskell98 from BASE_DEPENDS (since now the new hierarchical
    module names are being used throughout)
  + Added mtl to BASE_DEPENDS (needed for state monad)
  + Removed html from GHC66_DEPENDS (not needed since xhtml is now used)



git-svn-id: https://pandoc.googlecode.com/svn/trunk@580 788f1e2b-df1e-0410-8736-df70ead52e1b

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