{-# LANGUAGE CPP #-}
{-
Copyright (C) 2006-2012 John MacFarlane <jgm@berkeley.edu>

This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.

This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
GNU General Public License for more details.

You should have received a copy of the GNU General Public License
along with this program; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
-}

{- |
   Module      : Main
   Copyright   : Copyright (C) 2006-2012 John MacFarlane
   License     : GNU GPL, version 2 or above

   Maintainer  : John MacFarlane <jgm@berkeley@edu>
   Stability   : alpha
   Portability : portable

Parses command-line options and calls the appropriate readers and
writers.
-}
module Main where
import Text.Pandoc
import Text.Pandoc.PDF (tex2pdf)
import Text.Pandoc.Readers.LaTeX (handleIncludes)
import Text.Pandoc.Shared ( tabFilter, readDataFileUTF8, safeRead,
                            headerShift, normalize, err, warn )
import Text.Pandoc.XML ( toEntities, fromEntities )
import Text.Pandoc.SelfContained ( makeSelfContained )
import Text.Pandoc.Highlighting ( languages, Style, tango, pygments,
         espresso, zenburn, kate, haddock, monochrome )
import System.Environment ( getArgs, getProgName )
import System.Exit ( exitWith, ExitCode (..) )
import System.FilePath
import System.Console.GetOpt
import Data.Char ( toLower )
import Data.List ( intercalate, isPrefixOf )
import System.Directory ( getAppUserDataDirectory, doesFileExist, findExecutable )
import System.IO ( stdout )
import System.IO.Error ( isDoesNotExistError )
import qualified Control.Exception as E
import Control.Exception.Extensible ( throwIO )
import qualified Text.Pandoc.UTF8 as UTF8
import qualified Text.CSL as CSL
import Control.Monad (when, unless, liftM)
import Network.HTTP (simpleHTTP, mkRequest, getResponseBody, RequestMethod(..))
import Network.URI (parseURI, isURI, URI(..))
import qualified Data.ByteString.Lazy as B
import Text.CSL.Reference (Reference(..))

copyrightMessage :: String
copyrightMessage = "\nCopyright (C) 2006-2012 John MacFarlane\n" ++
                    "Web:  http://johnmacfarlane.net/pandoc\n" ++
                    "This is free software; see the source for copying conditions.  There is no\n" ++
                    "warranty, not even for merchantability or fitness for a particular purpose."

compileInfo :: String
compileInfo =
  "\nCompiled with citeproc-hs " ++ VERSION_citeproc_hs ++ ", texmath " ++
  VERSION_texmath ++ ", highlighting-kate " ++ VERSION_highlighting_kate ++
   ".\nSyntax highlighting is supported for the following languages:\n    " ++
       wrapWords 4 78 languages

-- | Converts a list of strings into a single string with the items printed as
-- comma separated words in lines with a maximum line length.
wrapWords :: Int -> Int -> [String] -> String
wrapWords indent c = wrap' (c - indent) (c - indent)
        where wrap' _    _         []     = ""
              wrap' cols remaining (x:xs) = if remaining == cols
                                               then x ++ wrap' cols (remaining - length x) xs
                                               else if (length x + 1) > remaining
                                                       then ",\n" ++ replicate indent ' ' ++ x ++ wrap' cols (cols - length x) xs
                                                       else ", "  ++ x ++ wrap' cols (remaining - (length x + 2)) xs

isTextFormat :: String -> Bool
isTextFormat s = takeWhile (`notElem` "+-") s `notElem` ["odt","docx","epub","epub3"]

-- | Data structure for command line options.
data Opt = Opt
    { optTabStop           :: Int     -- ^ Number of spaces per tab
    , optPreserveTabs      :: Bool    -- ^ Preserve tabs instead of converting to spaces
    , optStandalone        :: Bool    -- ^ Include header, footer
    , optReader            :: String  -- ^ Reader format
    , optWriter            :: String  -- ^ Writer format
    , optParseRaw          :: Bool    -- ^ Parse unconvertable HTML and TeX
    , optTableOfContents   :: Bool    -- ^ Include table of contents
    , optTransforms        :: [Pandoc -> Pandoc]  -- ^ Doc transforms to apply
    , optTemplate          :: Maybe FilePath  -- ^ Custom template
    , optVariables         :: [(String,String)] -- ^ Template variables to set
    , optOutputFile        :: String  -- ^ Name of output file
    , optNumberSections    :: Bool    -- ^ Number sections in LaTeX
    , optSectionDivs       :: Bool    -- ^ Put sections in div tags in HTML
    , optIncremental       :: Bool    -- ^ Use incremental lists in Slidy/Slideous/S5
    , optSelfContained     :: Bool    -- ^ Make HTML accessible offline
    , optSmart             :: Bool    -- ^ Use smart typography
    , optOldDashes         :: Bool    -- ^ Parse dashes like pandoc <=1.8.2.1
    , optHtml5             :: Bool    -- ^ Produce HTML5 in HTML
    , optHtmlQTags         :: Bool    -- ^ Use <q> tags in HTML
    , optHighlight         :: Bool    -- ^ Highlight source code
    , optHighlightStyle    :: Style   -- ^ Style to use for highlighted code
    , optChapters          :: Bool    -- ^ Use chapter for top-level sects
    , optHTMLMathMethod    :: HTMLMathMethod -- ^ Method to print HTML math
    , optReferenceODT      :: Maybe FilePath -- ^ Path of reference.odt
    , optReferenceDocx     :: Maybe FilePath -- ^ Path of reference.docx
    , optEpubStylesheet    :: Maybe String   -- ^ EPUB stylesheet
    , optEpubMetadata      :: String  -- ^ EPUB metadata
    , optEpubFonts         :: [FilePath] -- ^ EPUB fonts to embed
    , optEpubChapterLevel  :: Int     -- ^ Header level at which to split chapters
    , optTOCDepth          :: Int     -- ^ Number of levels to include in TOC
    , optDumpArgs          :: Bool    -- ^ Output command-line arguments
    , optIgnoreArgs        :: Bool    -- ^ Ignore command-line arguments
    , optReferenceLinks    :: Bool    -- ^ Use reference links in writing markdown, rst
    , optWrapText          :: Bool    -- ^ Wrap text
    , optColumns           :: Int     -- ^ Line length in characters
    , optPlugins           :: [Pandoc -> IO Pandoc] -- ^ Plugins to apply
    , optEmailObfuscation  :: ObfuscationMethod
    , optIdentifierPrefix  :: String
    , optIndentedCodeClasses :: [String] -- ^ Default classes for indented code blocks
    , optDataDir           :: Maybe FilePath
    , optCiteMethod        :: CiteMethod -- ^ Method to output cites
    , optBibliography      :: [String]
    , optCslFile           :: Maybe FilePath
    , optAbbrevsFile       :: Maybe FilePath
    , optListings          :: Bool       -- ^ Use listings package for code blocks
    , optLaTeXEngine       :: String     -- ^ Program to use for latex -> pdf
    , optSlideLevel        :: Maybe Int  -- ^ Header level that creates slides
    , optSetextHeaders     :: Bool       -- ^ Use atx headers for markdown level 1-2
    , optAscii             :: Bool       -- ^ Use ascii characters only in html
    , optTeXLigatures      :: Bool       -- ^ Use TeX ligatures for quotes/dashes
    }

-- | Defaults for command-line options.
defaultOpts :: Opt
defaultOpts = Opt
    { optTabStop           = 4
    , optPreserveTabs      = False
    , optStandalone        = False
    , optReader            = ""    -- null for default reader
    , optWriter            = ""    -- null for default writer
    , optParseRaw          = False
    , optTableOfContents   = False
    , optTransforms        = []
    , optTemplate          = Nothing
    , optVariables         = []
    , optOutputFile        = "-"    -- "-" means stdout
    , optNumberSections    = False
    , optSectionDivs       = False
    , optIncremental       = False
    , optSelfContained     = False
    , optSmart             = False
    , optOldDashes         = False
    , optHtml5             = False
    , optHtmlQTags         = False
    , optHighlight         = True
    , optHighlightStyle    = pygments
    , optChapters          = False
    , optHTMLMathMethod    = PlainMath
    , optReferenceODT      = Nothing
    , optReferenceDocx     = Nothing
    , optEpubStylesheet    = Nothing
    , optEpubMetadata      = ""
    , optEpubFonts         = []
    , optEpubChapterLevel  = 1
    , optTOCDepth          = 3
    , optDumpArgs          = False
    , optIgnoreArgs        = False
    , optReferenceLinks    = False
    , optWrapText          = True
    , optColumns           = 72
    , optPlugins           = []
    , optEmailObfuscation  = JavascriptObfuscation
    , optIdentifierPrefix  = ""
    , optIndentedCodeClasses = []
    , optDataDir           = Nothing
    , optCiteMethod        = Citeproc
    , optBibliography      = []
    , optCslFile           = Nothing
    , optAbbrevsFile       = Nothing
    , optListings          = False
    , optLaTeXEngine       = "pdflatex"
    , optSlideLevel        = Nothing
    , optSetextHeaders     = True
    , optAscii             = False
    , optTeXLigatures      = True
    }

-- | A list of functions, each transforming the options data structure
--   in response to a command-line option.
options :: [OptDescr (Opt -> IO Opt)]
options =
    [ Option "fr" ["from","read"]
                 (ReqArg
                  (\arg opt -> return opt { optReader = map toLower arg })
                  "FORMAT")
                 ""

    , Option "tw" ["to","write"]
                 (ReqArg
                  (\arg opt -> return opt { optWriter = map toLower arg })
                  "FORMAT")
                 ""

    , Option "o" ["output"]
                 (ReqArg
                  (\arg opt -> return opt { optOutputFile = arg })
                  "FILENAME")
                 "" -- "Name of output file"

    , Option "" ["data-dir"]
                 (ReqArg
                  (\arg opt -> return opt { optDataDir = Just arg })
                 "DIRECTORY") -- "Directory containing pandoc data files."
                ""

    , Option "" ["strict"]
                 (NoArg
                  (\opt -> do
                      err 59 $ "The --strict option has been removed.\n" ++
                               "Use `markdown_strict' input or output format instead."
                      return opt ))
                 "" -- "Disable markdown syntax extensions"

    , Option "R" ["parse-raw"]
                 (NoArg
                  (\opt -> return opt { optParseRaw = True }))
                 "" -- "Parse untranslatable HTML codes and LaTeX environments as raw"

    , Option "S" ["smart"]
                 (NoArg
                  (\opt -> return opt { optSmart = True }))
                 "" -- "Use smart quotes, dashes, and ellipses"

    , Option "" ["old-dashes"]
                 (NoArg
                  (\opt -> return opt { optSmart = True
                                      , optOldDashes = True }))
                 "" -- "Use smart quotes, dashes, and ellipses"

    , Option "" ["base-header-level"]
                 (ReqArg
                  (\arg opt ->
                      case safeRead arg of
                           Just t | t > 0 -> do
                               let oldTransforms = optTransforms opt
                               let shift = t - 1
                               return opt{ optTransforms =
                                           headerShift shift : oldTransforms }
                           _              -> err 19
                                       "base-header-level must be a number > 0")
                  "NUMBER")
                 "" -- "Headers base level"

     , Option "" ["indented-code-classes"]
                  (ReqArg
                   (\arg opt -> return opt { optIndentedCodeClasses = words $
                                             map (\c -> if c == ',' then ' ' else c) arg })
                   "STRING")
                  "" -- "Classes (whitespace- or comma-separated) to use for indented code-blocks"

    , Option "" ["normalize"]
                 (NoArg
                  (\opt -> return opt { optTransforms =
                                   normalize : optTransforms opt } ))
                 "" -- "Normalize the Pandoc AST"

    , Option "p" ["preserve-tabs"]
                 (NoArg
                  (\opt -> return opt { optPreserveTabs = True }))
                 "" -- "Preserve tabs instead of converting to spaces"

    , Option "" ["tab-stop"]
                 (ReqArg
                  (\arg opt ->
                      case safeRead arg of
                           Just t | t > 0 -> return opt { optTabStop = t }
                           _              -> err 31
                                          "tab-stop must be a number greater than 0")
                  "NUMBER")
                 "" -- "Tab stop (default 4)"

    , Option "s" ["standalone"]
                 (NoArg
                  (\opt -> return opt { optStandalone = True }))
                 "" -- "Include needed header and footer on output"

    , Option "" ["template"]
                 (ReqArg
                  (\arg opt -> do
                     return opt{ optTemplate = Just arg,
                                 optStandalone = True })
                  "FILENAME")
                 "" -- "Use custom template"

    , Option "V" ["variable"]
                 (ReqArg
                  (\arg opt -> do
                     let (key,val) = case break (`elem` ":=") arg of
                                       (k,_:v) -> (k,v)
                                       (k,_)   -> (k,"true")
                     return opt{ optVariables = (key,val) : optVariables opt })
                  "KEY[:VALUE]")
                 "" -- "Use custom template"

    , Option "D" ["print-default-template"]
                 (ReqArg
                  (\arg _ -> do
                     templ <- getDefaultTemplate Nothing arg
                     case templ of
                          Right t -> UTF8.hPutStr stdout t
                          Left e  -> error $ show e
                     exitWith ExitSuccess)
                  "FORMAT")
                 "" -- "Print default template for FORMAT"

    , Option "" ["no-wrap"]
                 (NoArg
                  (\opt -> return opt { optWrapText = False }))
                 "" -- "Do not wrap text in output"

    , Option "" ["columns"]
                 (ReqArg
                  (\arg opt ->
                      case safeRead arg of
                           Just t | t > 0 -> return opt { optColumns = t }
                           _              -> err 33 $
                                   "columns must be a number greater than 0")
                 "NUMBER")
                 "" -- "Length of line in characters"

    , Option "" ["toc", "table-of-contents"]
                (NoArg
                 (\opt -> return opt { optTableOfContents = True }))
               "" -- "Include table of contents"

    , Option "" ["toc-depth"]
                 (ReqArg
                  (\arg opt -> do
                      case safeRead arg of
                           Just t | t >= 1 && t <= 6 ->
                                    return opt { optTOCDepth = t,
                                                 optTableOfContents = True }
                           _      -> err 57 $
                                    "TOC level must be a number between 1 and 6")
                 "NUMBER")
                 "" -- "Number of levels to include in TOC"

    , Option "" ["no-highlight"]
                (NoArg
                 (\opt -> return opt { optHighlight = False }))
                 "" -- "Don't highlight source code"

    , Option "" ["highlight-style"]
                (ReqArg
                 (\arg opt -> do
                   newStyle <- case map toLower arg of
                                     "pygments"   -> return pygments
                                     "tango"      -> return tango
                                     "espresso"   -> return espresso
                                     "zenburn"    -> return zenburn
                                     "kate"       -> return kate
                                     "monochrome" -> return monochrome
                                     "haddock"    -> return haddock
                                     _            -> err 39 $
                                         "Unknown style :" ++ arg
                   return opt{ optHighlightStyle = newStyle })
                 "STYLE")
                 "" -- "Style for highlighted code"

    , Option "H" ["include-in-header"]
                 (ReqArg
                  (\arg opt -> do
                     text <- UTF8.readFile arg
                     -- add new ones to end, so they're included in order specified
                     let newvars = optVariables opt ++ [("header-includes",text)]
                     return opt { optVariables = newvars,
                                  optStandalone = True })
                  "FILENAME")
                 "" -- "File to include at end of header (implies -s)"

    , Option "B" ["include-before-body"]
                 (ReqArg
                  (\arg opt -> do
                     text <- UTF8.readFile arg
                     -- add new ones to end, so they're included in order specified
                     let newvars = optVariables opt ++ [("include-before",text)]
                     return opt { optVariables = newvars,
                                  optStandalone = True })
                  "FILENAME")
                 "" -- "File to include before document body"

    , Option "A" ["include-after-body"]
                 (ReqArg
                  (\arg opt -> do
                     text <- UTF8.readFile arg
                     -- add new ones to end, so they're included in order specified
                     let newvars = optVariables opt ++ [("include-after",text)]
                     return opt { optVariables = newvars,
                                  optStandalone = True })
                  "FILENAME")
                 "" -- "File to include after document body"

    , Option "" ["self-contained"]
                 (NoArg
                  (\opt -> return opt { optSelfContained = True,
                                        optVariables = ("slidy-url","slidy") :
                                                       optVariables opt,
                                        optStandalone = True }))
                 "" -- "Make slide shows include all the needed js and css"

    , Option "" ["offline"]
                 (NoArg
                  (\opt -> do warn $ "--offline is deprecated. Use --self-contained instead."
                              return opt { optSelfContained = True,
                                           optStandalone = True }))
                 "" -- "Make slide shows include all the needed js and css"
                 -- deprecated synonym for --self-contained

    , Option "5" ["html5"]
                 (NoArg
                  (\opt -> do
                     warn $ "--html5 is deprecated. "
                       ++ "Use the html5 output format instead."
                     return opt { optHtml5 = True }))
                 "" -- "Produce HTML5 in HTML output"

    , Option "" ["html-q-tags"]
                 (NoArg
                  (\opt -> do
                     return opt { optHtmlQTags = True }))
                 "" -- "Use <q> tags for quotes in HTML"

    , Option "" ["ascii"]
                 (NoArg
                  (\opt -> return opt { optAscii = True }))
                 ""  -- "Use ascii characters only in HTML output"

    , Option "" ["reference-links"]
                 (NoArg
                  (\opt -> return opt { optReferenceLinks = True } ))
                 "" -- "Use reference links in parsing HTML"

    , Option "" ["atx-headers"]
                 (NoArg
                  (\opt -> return opt { optSetextHeaders = False } ))
                 "" -- "Use atx-style headers for markdown"

    , Option "" ["chapters"]
                 (NoArg
                  (\opt -> return opt { optChapters = True }))
                 "" -- "Use chapter for top-level sections in LaTeX, DocBook"

    , Option "N" ["number-sections"]
                 (NoArg
                  (\opt -> return opt { optNumberSections = True }))
                 "" -- "Number sections in LaTeX"

    , Option "" ["no-tex-ligatures"]
                 (NoArg
                  (\opt -> return opt { optTeXLigatures = False }))
                 "" -- "Don't use tex ligatures for quotes, dashes"

    , Option "" ["listings"]
                 (NoArg
                  (\opt -> return opt { optListings = True }))
                 "" -- "Use listings package for LaTeX code blocks"

    , Option "i" ["incremental"]
                 (NoArg
                  (\opt -> return opt { optIncremental = True }))
                 "" -- "Make list items display incrementally in Slidy/Slideous/S5"

    , Option "" ["slide-level"]
                 (ReqArg
                  (\arg opt -> do
                      case safeRead arg of
                           Just t | t >= 1 && t <= 6 ->
                                    return opt { optSlideLevel = Just t }
                           _      -> err 39 $
                                    "slide level must be a number between 1 and 6")
                 "NUMBER")
                 "" -- "Force header level for slides"

    , Option "" ["section-divs"]
                 (NoArg
                  (\opt -> return opt { optSectionDivs = True }))
                 "" -- "Put sections in div tags in HTML"

    , Option "" ["email-obfuscation"]
                 (ReqArg
                  (\arg opt -> do
                     method <- case arg of
                            "references" -> return ReferenceObfuscation
                            "javascript" -> return JavascriptObfuscation
                            "none"       -> return NoObfuscation
                            _            -> err 6
                               ("Unknown obfuscation method: " ++ arg)
                     return opt { optEmailObfuscation = method })
                  "none|javascript|references")
                 "" -- "Method for obfuscating email in HTML"

     , Option "" ["id-prefix"]
                  (ReqArg
                   (\arg opt -> return opt { optIdentifierPrefix = arg })
                   "STRING")
                  "" -- "Prefix to add to automatically generated HTML identifiers"

    , Option "T" ["title-prefix"]
                 (ReqArg
                  (\arg opt -> do
                    let newvars = ("title-prefix", arg) : optVariables opt
                    return opt { optVariables = newvars,
                                 optStandalone = True })
                  "STRING")
                 "" -- "String to prefix to HTML window title"

    , Option "c" ["css"]
                 (ReqArg
                  (\arg opt -> do
                     -- add new link to end, so it is included in proper order
                     let newvars = optVariables opt ++ [("css",arg)]
                     return opt { optVariables = newvars,
                                  optStandalone = True })
                  "URL")
                 "" -- "Link to CSS style sheet"

    , Option "" ["reference-odt"]
                 (ReqArg
                  (\arg opt -> do
                    return opt { optReferenceODT = Just arg })
                  "FILENAME")
                 "" -- "Path of custom reference.odt"

    , Option "" ["reference-docx"]
                 (ReqArg
                  (\arg opt -> do
                    return opt { optReferenceDocx = Just arg })
                  "FILENAME")
                 "" -- "Path of custom reference.docx"

    , Option "" ["epub-stylesheet"]
                 (ReqArg
                  (\arg opt -> do
                     text <- UTF8.readFile arg
                     return opt { optEpubStylesheet = Just text })
                  "FILENAME")
                 "" -- "Path of epub.css"

    , Option "" ["epub-cover-image"]
                 (ReqArg
                  (\arg opt ->
                     return opt { optVariables =
                                 ("epub-cover-image", arg) : optVariables opt })
                  "FILENAME")
                 "" -- "Path of epub cover image"

    , Option "" ["epub-metadata"]
                 (ReqArg
                  (\arg opt -> do
                     text <- UTF8.readFile arg
                     return opt { optEpubMetadata = text })
                  "FILENAME")
                 "" -- "Path of epub metadata file"

    , Option "" ["epub-embed-font"]
                 (ReqArg
                  (\arg opt -> do
                     return opt{ optEpubFonts = arg : optEpubFonts opt })
                  "FILE")
                 "" -- "Directory of fonts to embed"

    , Option "" ["epub-chapter-level"]
                 (ReqArg
                  (\arg opt -> do
                      case safeRead arg of
                           Just t | t >= 1 && t <= 6 ->
                                    return opt { optEpubChapterLevel = t }
                           _      -> err 59 $
                                    "chapter level must be a number between 1 and 6")
                 "NUMBER")
                 "" -- "Header level at which to split chapters in EPUB"

    , Option "" ["latex-engine"]
                 (ReqArg
                  (\arg opt -> do
                     let b = takeBaseName arg
                     if (b == "pdflatex" || b == "lualatex" || b == "xelatex")
                        then return opt { optLaTeXEngine = arg }
                        else err 45 "latex-engine must be pdflatex, lualatex, or xelatex.")
                  "PROGRAM")
                 "" -- "Name of latex program to use in generating PDF"

    , Option "" ["bibliography"]
                 (ReqArg
                  (\arg opt -> return opt { optBibliography = (optBibliography opt) ++ [arg] })
                  "FILENAME")
                 ""

    , Option "" ["csl"]
                 (ReqArg
                  (\arg opt -> return opt { optCslFile = Just arg })
                  "FILENAME")
                 ""

    , Option "" ["citation-abbreviations"]
                 (ReqArg
                  (\arg opt -> return opt { optAbbrevsFile = Just arg })
                  "FILENAME")
                 ""

    , Option "" ["natbib"]
                 (NoArg
                  (\opt -> return opt { optCiteMethod = Natbib }))
                 "" -- "Use natbib cite commands in LaTeX output"

    , Option "" ["biblatex"]
                 (NoArg
                  (\opt -> return opt { optCiteMethod = Biblatex }))
                 "" -- "Use biblatex cite commands in LaTeX output"

    , Option "m" ["latexmathml", "asciimathml"]
                 (OptArg
                  (\arg opt ->
                      return opt { optHTMLMathMethod = LaTeXMathML arg })
                  "URL")
                 "" -- "Use LaTeXMathML script in html output"

    , Option "" ["mathml"]
                 (OptArg
                  (\arg opt ->
                      return opt { optHTMLMathMethod = MathML arg })
                   "URL")
                 "" -- "Use mathml for HTML math"

    , Option "" ["mimetex"]
                 (OptArg
                  (\arg opt -> do
                      let url' = case arg of
                                      Just u   -> u ++ "?"
                                      Nothing  -> "/cgi-bin/mimetex.cgi?"
                      return opt { optHTMLMathMethod = WebTeX url' })
                  "URL")
                 "" -- "Use mimetex for HTML math"

    , Option "" ["webtex"]
                 (OptArg
                  (\arg opt -> do
                      let url' = case arg of
                                      Just u   -> u
                                      Nothing  -> "http://chart.apis.google.com/chart?cht=tx&chl="
                      return opt { optHTMLMathMethod = WebTeX url' })
                  "URL")
                 "" -- "Use web service for HTML math"

    , Option "" ["jsmath"]
                 (OptArg
                  (\arg opt -> return opt { optHTMLMathMethod = JsMath arg})
                  "URL")
                 "" -- "Use jsMath for HTML math"

    , Option "" ["mathjax"]
                 (OptArg
                  (\arg opt -> do
                      let url' = case arg of
                                      Just u   -> u
                                      Nothing  -> "http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"
                      return opt { optHTMLMathMethod = MathJax url'})
                  "URL")
                 "" -- "Use MathJax for HTML math"

    , Option "" ["gladtex"]
                 (NoArg
                  (\opt -> return opt { optHTMLMathMethod = GladTeX }))
                 "" -- "Use gladtex for HTML math"

    , Option "" ["dump-args"]
                 (NoArg
                  (\opt -> return opt { optDumpArgs = True }))
                 "" -- "Print output filename and arguments to stdout."

    , Option "" ["ignore-args"]
                 (NoArg
                  (\opt -> return opt { optIgnoreArgs = True }))
                 "" -- "Ignore command-line arguments."

    , Option "v" ["version"]
                 (NoArg
                  (\_ -> do
                     prg <- getProgName
                     UTF8.hPutStrLn stdout (prg ++ " " ++ pandocVersion ++ compileInfo ++
                                       copyrightMessage)
                     exitWith ExitSuccess ))
                 "" -- "Print version"

    , Option "h" ["help"]
                 (NoArg
                  (\_ -> do
                     prg <- getProgName
                     UTF8.hPutStr stdout (usageMessage prg options)
                     exitWith ExitSuccess ))
                 "" -- "Show help"

    ]

-- Returns usage message
usageMessage :: String -> [OptDescr (Opt -> IO Opt)] -> String
usageMessage programName = usageInfo
  (programName ++ " [OPTIONS] [FILES]" ++ "\nInput formats:  " ++
  (wrapWords 16 78 $ readers'names) ++ "\nOutput formats: " ++
  (wrapWords 16 78 $ writers'names) ++ "\nOptions:")
  where
    writers'names = map fst writers
    readers'names = map fst readers

-- Determine default reader based on source file extensions
defaultReaderName :: String -> [FilePath] -> String
defaultReaderName fallback [] = fallback
defaultReaderName fallback (x:xs) =
  case takeExtension (map toLower x) of
    ".xhtml"    -> "html"
    ".html"     -> "html"
    ".htm"      -> "html"
    ".tex"      -> "latex"
    ".latex"    -> "latex"
    ".ltx"      -> "latex"
    ".rst"      -> "rst"
    ".lhs"      -> "markdown+lhs"
    ".db"       -> "docbook"
    ".wiki"     -> "mediawiki"
    ".textile"  -> "textile"
    ".native"   -> "native"
    ".json"     -> "json"
    _           -> defaultReaderName fallback xs

-- Returns True if extension of first source is .lhs
lhsExtension :: [FilePath] -> Bool
lhsExtension (x:_) = takeExtension x == ".lhs"
lhsExtension _ = False

-- Determine default writer based on output file extension
defaultWriterName :: FilePath -> String
defaultWriterName "-" = "html" -- no output file
defaultWriterName x =
  case takeExtension (map toLower x) of
    ""          -> "markdown" -- empty extension
    ".tex"      -> "latex"
    ".latex"    -> "latex"
    ".ltx"      -> "latex"
    ".context"  -> "context"
    ".ctx"      -> "context"
    ".rtf"      -> "rtf"
    ".rst"      -> "rst"
    ".s5"       -> "s5"
    ".native"   -> "native"
    ".json"     -> "json"
    ".txt"      -> "markdown"
    ".text"     -> "markdown"
    ".md"       -> "markdown"
    ".markdown" -> "markdown"
    ".textile"  -> "textile"
    ".lhs"      -> "markdown+lhs"
    ".texi"     -> "texinfo"
    ".texinfo"  -> "texinfo"
    ".db"       -> "docbook"
    ".odt"      -> "odt"
    ".docx"     -> "docx"
    ".epub"     -> "epub"
    ".org"      -> "org"
    ".asciidoc" -> "asciidoc"
    ".pdf"      -> "latex"
    ".fb2"      -> "fb2"
    ['.',y] | y `elem` ['1'..'9'] -> "man"
    _          -> "html"

main :: IO ()
main = do

  rawArgs <- liftM (map UTF8.decodeArg) getArgs
  prg <- getProgName
  let compatMode = (prg == "hsmarkdown")

  let (actions, args, errors) = if compatMode
                                  then ([], rawArgs, [])
                                  else getOpt Permute options rawArgs

  unless (null errors) $
     err 2 $ concat $ errors ++
        ["Try " ++ prg ++ " --help for more information."]

  let defaultOpts' = if compatMode
                       then defaultOpts { optReader = "markdown_strict"
                                        , optWriter = "html"
                                        , optEmailObfuscation =
                                           ReferenceObfuscation }
                       else defaultOpts

  -- thread option data structure through all supplied option actions
  opts <- foldl (>>=) (return defaultOpts') actions

  let Opt    {  optTabStop           = tabStop
              , optPreserveTabs      = preserveTabs
              , optStandalone        = standalone
              , optReader            = readerName
              , optWriter            = writerName
              , optParseRaw          = parseRaw
              , optVariables         = variables
              , optTableOfContents   = toc
              , optTransforms        = transforms
              , optTemplate          = templatePath
              , optOutputFile        = outputFile
              , optNumberSections    = numberSections
              , optSectionDivs       = sectionDivs
              , optIncremental       = incremental
              , optSelfContained     = selfContained
              , optSmart             = smart
              , optOldDashes         = oldDashes
              , optHtml5             = html5
              , optHtmlQTags         = htmlQTags
              , optHighlight         = highlight
              , optHighlightStyle    = highlightStyle
              , optChapters          = chapters
              , optHTMLMathMethod    = mathMethod
              , optReferenceODT      = referenceODT
              , optReferenceDocx     = referenceDocx
              , optEpubStylesheet    = epubStylesheet
              , optEpubMetadata      = epubMetadata
              , optEpubFonts         = epubFonts
              , optEpubChapterLevel  = epubChapterLevel
              , optTOCDepth          = epubTOCDepth
              , optDumpArgs          = dumpArgs
              , optIgnoreArgs        = ignoreArgs
              , optReferenceLinks    = referenceLinks
              , optWrapText          = wrap
              , optColumns           = columns
              , optEmailObfuscation  = obfuscationMethod
              , optIdentifierPrefix  = idPrefix
              , optIndentedCodeClasses = codeBlockClasses
              , optDataDir           = mbDataDir
              , optBibliography      = reffiles
              , optCslFile           = mbCsl
              , optAbbrevsFile       = cslabbrevs
              , optCiteMethod        = citeMethod
              , optListings          = listings
              , optLaTeXEngine       = latexEngine
              , optSlideLevel        = slideLevel
              , optSetextHeaders     = setextHeaders
              , optAscii             = ascii
              , optTeXLigatures      = texLigatures
             } = opts

  when dumpArgs $
    do UTF8.hPutStrLn stdout outputFile
       mapM_ (\arg -> UTF8.hPutStrLn stdout arg) args
       exitWith ExitSuccess

  let sources = if ignoreArgs then [] else args

  datadir <- case mbDataDir of
                  Nothing   -> E.catch
                                 (liftM Just $ getAppUserDataDirectory "pandoc")
                                 (\e -> let _ = (e :: E.SomeException)
                                        in  return Nothing)
                  Just _    -> return mbDataDir

  -- assign reader and writer based on options and filenames
  let readerName' = if null readerName
                      then let fallback = if any isURI sources
                                             then "html"
                                             else "markdown"
                           in  defaultReaderName fallback sources
                      else readerName

  let writerName' = if null writerName
                      then defaultWriterName outputFile
                      else writerName

  let pdfOutput = map toLower (takeExtension outputFile) == ".pdf"

  let laTeXOutput = "latex" `isPrefixOf` writerName' ||
                    "beamer" `isPrefixOf` writerName'

  when pdfOutput $ do
    -- make sure writer is latex or beamer
    unless laTeXOutput $
      err 47 $ "cannot produce pdf output with " ++ writerName' ++ " writer"
    -- check for latex program
    mbLatex <- findExecutable latexEngine
    case mbLatex of
         Nothing  -> err 41 $
           latexEngine ++ " not found. " ++
           latexEngine ++ " is needed for pdf output."
         Just _   -> return ()

  reader <- case getReader readerName' of
     Right r  -> return r
     Left e   -> err 7 e

  let standalone' = standalone || not (isTextFormat writerName') || pdfOutput

  templ <- case templatePath of
                _ | not standalone' -> return ""
                Nothing -> do
                           deftemp <- getDefaultTemplate datadir writerName'
                           case deftemp of
                                 Left e   -> throwIO e
                                 Right t  -> return t
                Just tp -> do
                           -- strip off extensions
                           let format = takeWhile (`notElem` "+-") writerName'
                           let tp' = case takeExtension tp of
                                          ""   -> tp <.> format
                                          _    -> tp
                           E.catch (UTF8.readFile tp')
                             (\e -> if isDoesNotExistError e
                                       then E.catch
                                             (readDataFileUTF8 datadir
                                                ("templates" </> tp'))
                                             (\e' -> let _ = (e' :: E.SomeException)
                                                     in throwIO e')
                                       else throwIO e)

  variables' <- case mathMethod of
                      LaTeXMathML Nothing -> do
                         s <- readDataFileUTF8 datadir
                                 ("LaTeXMathML.js")
                         return $ ("mathml-script", s) : variables
                      MathML Nothing -> do
                         s <- readDataFileUTF8 datadir
                                 ("MathMLinHTML.js")
                         return $ ("mathml-script", s) : variables
                      _ -> return variables

  variables'' <- if "dzslides" `isPrefixOf` writerName'
                    then do
                        dztempl <- readDataFileUTF8 datadir
                                     ("dzslides" </> "template.html")
                        let dzcore = unlines $ dropWhile (not . isPrefixOf "<!-- {{{{ dzslides core")
                                             $ lines dztempl
                        return $ ("dzslides-core", dzcore) : variables'
                    else return variables'

  -- unescape reference ids, which may contain XML entities, so
  -- that we can do lookups with regular string equality
  let unescapeRefId ref = ref{ refId = fromEntities (refId ref) }

  refs <- mapM (\f -> E.catch (CSL.readBiblioFile f)
                   (\e -> let _ = (e :: E.SomeException)
                          in  err 23 $ "Error reading bibliography `" ++ f ++
                                       "'" ++ "\n" ++ show e))
          reffiles >>=
           return . map unescapeRefId . concat

  mbsty <- if citeMethod == Citeproc && not (null refs)
              then do
                csl <- CSL.parseCSL =<<
                        case mbCsl of
                            Nothing      -> readDataFileUTF8 datadir
                                              "default.csl"
                            Just cslfile -> do
                                  exists <- doesFileExist cslfile
                                  if exists
                                     then UTF8.readFile cslfile
                                     else do
                                       csldir <- getAppUserDataDirectory "csl"
                                       readDataFileUTF8 (Just csldir)
                                           (replaceExtension cslfile "csl")
                abbrevs <- maybe (return []) CSL.readJsonAbbrevFile cslabbrevs
                return $ Just csl { CSL.styleAbbrevs = abbrevs }
              else return Nothing

  let sourceDir = case sources of
                        []    -> "."
                        (x:_) -> case parseURI x of
                                    Just u
                                      | uriScheme u `elem` ["http:","https:"] ->
                                          show u{ uriPath = "", uriQuery = "", uriFragment = "" }
                                    _ -> takeDirectory x

  let readerOpts = def{ readerSmart = smart || (texLigatures &&
                          (laTeXOutput || "context" `isPrefixOf` writerName'))
                      , readerStandalone = standalone'
                      , readerParseRaw = parseRaw
                      , readerColumns = columns
                      , readerTabStop = tabStop
                      , readerOldDashes = oldDashes
                      , readerReferences = refs
                      , readerCitationStyle = mbsty
                      , readerIndentedCodeClasses = codeBlockClasses
                      , readerApplyMacros = not laTeXOutput
                      }

  let writerOptions = def { writerStandalone       = standalone',
                            writerTemplate         = templ,
                            writerVariables        = variables'',
                            writerTabStop          = tabStop,
                            writerTableOfContents  = toc,
                            writerHTMLMathMethod   = mathMethod,
                            writerIncremental      = incremental,
                            writerCiteMethod       = citeMethod,
                            writerBiblioFiles      = reffiles,
                            writerIgnoreNotes      = False,
                            writerNumberSections   = numberSections,
                            writerSectionDivs      = sectionDivs,
                            writerReferenceLinks   = referenceLinks,
                            writerWrapText         = wrap,
                            writerColumns          = columns,
                            writerEmailObfuscation = obfuscationMethod,
                            writerIdentifierPrefix = idPrefix,
                            writerSourceDirectory  = sourceDir,
                            writerUserDataDir      = datadir,
                            writerHtml5            = html5,
                            writerHtmlQTags        = htmlQTags,
                            writerChapters         = chapters,
                            writerListings         = listings,
                            writerBeamer           = False,
                            writerSlideLevel       = slideLevel,
                            writerHighlight        = highlight,
                            writerHighlightStyle   = highlightStyle,
                            writerSetextHeaders    = setextHeaders,
                            writerTeXLigatures     = texLigatures,
                            writerEpubMetadata     = epubMetadata,
                            writerEpubStylesheet   = epubStylesheet,
                            writerEpubFonts        = epubFonts,
                            writerEpubChapterLevel = epubChapterLevel,
                            writerTOCDepth         = epubTOCDepth,
                            writerReferenceODT     = referenceODT,
                            writerReferenceDocx    = referenceDocx
                          }

  when (not (isTextFormat writerName') && outputFile == "-") $
    err 5 $ "Cannot write " ++ writerName' ++ " output to stdout.\n" ++
            "Specify an output file using the -o option."

  let readSources [] = mapM readSource ["-"]
      readSources srcs = mapM readSource srcs
      readSource "-" = UTF8.getContents
      readSource src = case parseURI src of
                            Just u | uriScheme u `elem` ["http:","https:"] ->
                                       readURI u
                            _       -> UTF8.readFile src
      readURI uri = simpleHTTP (mkRequest GET uri) >>= getResponseBody >>=
                      return . UTF8.toStringLazy  -- treat all as UTF8

  let convertTabs = tabFilter (if preserveTabs then 0 else tabStop)

  let handleIncludes' = if readerName' == "latex" || readerName' == "latex+lhs"
                           then handleIncludes
                           else return

  doc <- readSources sources >>=
           handleIncludes' . convertTabs . intercalate "\n" >>=
           reader readerOpts

  let doc0 = foldr ($) doc transforms

  let writeBinary :: B.ByteString -> IO ()
      writeBinary = B.writeFile (UTF8.encodePath outputFile)

  let writerFn :: FilePath -> String -> IO ()
      writerFn "-" = UTF8.putStr
      writerFn f   = UTF8.writeFile f

  case getWriter writerName' of
    Left e -> err 9 e
    Right (IOStringWriter f) -> f writerOptions doc0 >>= writerFn outputFile
    Right (IOByteStringWriter f) -> f writerOptions doc0 >>= writeBinary
    Right (PureStringWriter f)
      | pdfOutput -> do
              res <- tex2pdf latexEngine $ f writerOptions doc0
              case res of
                   Right pdf -> writeBinary pdf
                   Left err' -> err 43 $ UTF8.toStringLazy err'
      | otherwise -> selfcontain (f writerOptions doc0 ++
                                  ['\n' | not standalone'])
                      >>= writerFn outputFile . handleEntities
          where htmlFormat = writerName' `elem`
                               ["html","html+lhs","html5","html5+lhs",
                               "s5","slidy","slideous","dzslides"]
                selfcontain = if selfContained && htmlFormat
                                 then makeSelfContained datadir
                                 else return
                handleEntities = if htmlFormat && ascii
                                    then toEntities
                                    else id